Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 SEC9YGR009C 1956 nt4.95□□□□□ -1.62
SSU72P53538 DBF4YDR052C 2115 nt4.94□□□□□ -1.62
SSU72P53538 ARN1YHL040C 1884 nt4.94□□□□□ -1.62
SSU72P53538 APL6YGR261C 2430 nt4.94□□□□□ -1.62
SSU72P53538 SUP2tY(GUA)D 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP11tY(GUA)F1 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP6tY(GUA)F2 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP7tY(GUA)J1 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP4tY(GUA)J2 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP5tY(GUA)M1 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP8tY(GUA)M2 75 nt4.94□□□□□ -1.62
SSU72P53538 SUP3tY(GUA)O 75 nt4.94□□□□□ -1.62
SSU72P53538 YMR252CYMR252C 405 nt4.94□□□□□ -1.62
SSU72P53538 MDY2YOL111C 639 nt4.94□□□□□ -1.62
SSU72P53538 SCO2YBR024W 906 nt4.94□□□□□ -1.62
SSU72P53538 YPR196WYPR196W 1413 nt4.94□□□□□ -1.62
SSU72P53538 PSE1YMR308C 3270 nt4.94□□□□□ -1.62
SSU72P53538 ECM7YLR443W 1347 nt4.94□□□□□ -1.62
SSU72P53538 VPS4YPR173C 1314 nt4.94□□□□□ -1.62
SSU72P53538 FUM1YPL262W 1467 nt4.94□□□□□ -1.62
SSU72P53538 YNL247WYNL247W 2304 nt4.94□□□□□ -1.62
SSU72P53538 MID1YNL291C 1647 nt4.94□□□□□ -1.62
SSU72P53538 YTP1YNL237W 1380 nt4.93□□□□□ -1.62
SSU72P53538 PEX19YDL065C 1029 nt4.93□□□□□ -1.62
SSU72P53538 YEL068CYEL068C 333 nt4.93□□□□□ -1.62
SSU72P53538 VPS24YKL041W 675 nt4.93□□□□□ -1.62
SSU72P53538 YJU2YKL095W 837 nt4.93□□□□□ -1.62
SSU72P53538 POR1YNL055C 852 nt4.93□□□□□ -1.62
SSU72P53538 YNR040WYNR040W 771 nt4.93□□□□□ -1.62
SSU72P53538 YPL136WYPL136W 369 nt4.93□□□□□ -1.62
SSU72P53538 DAP1YPL170W 459 nt4.93□□□□□ -1.62
SSU72P53538 IES1YFL013C 2079 nt4.93□□□□□ -1.62
SSU72P53538 CDC1YDR182W 1476 nt4.93□□□□□ -1.62
SSU72P53538 KKQ8YKL168C 2175 nt4.92□□□□□ -1.62
SSU72P53538 FET3YMR058W 1911 nt4.92□□□□□ -1.62
SSU72P53538 UGA1YGR019W 1416 nt4.92□□□□□ -1.62
SSU72P53538 MAK31YCR020C-A 267 nt4.92□□□□□ -1.62
SSU72P53538 YET3YDL072C 612 nt4.92□□□□□ -1.62
SSU72P53538 YER084WYER084W 387 nt4.92□□□□□ -1.62
SSU72P53538 YML083CYML083C 1257 nt4.92□□□□□ -1.62
SSU72P53538 NHP6BYBR089C-A 300 nt4.92□□□□□ -1.62
SSU72P53538 ARB1YER036C 1833 nt4.92□□□□□ -1.62
SSU72P53538 EEB1YPL095C 1371 nt4.91□□□□□ -1.62
SSU72P53538 IPK1YDR315C 846 nt4.91□□□□□ -1.62
SSU72P53538 OPI7YDR360W 435 nt4.91□□□□□ -1.62
SSU72P53538 YHR218W-AYHR218W-A 318 nt4.91□□□□□ -1.62
SSU72P53538 CAF40YNL288W 1122 nt4.91□□□□□ -1.62
SSU72P53538 YBL112CYBL112C 318 nt4.91□□□□□ -1.62
SSU72P53538 ERI1YPL096C-A 207 nt4.91□□□□□ -1.62
SSU72P53538 ENP1YBR247C 1452 nt4.91□□□□□ -1.62
SSU72P53538 CNE1YAL058W 1509 nt4.91□□□□□ -1.62
SSU72P53538 BLM10YFL007W 6432 nt4.91□□□□□ -1.62
SSU72P53538 SRG1SRG1 551 nt4.9□□□□□ -1.63
SSU72P53538 YDR015CYDR015C 240 nt4.9□□□□□ -1.63
SSU72P53538 YDR034W-BYDR034W-B 156 nt4.9□□□□□ -1.63
SSU72P53538 ECT1YGR007W 972 nt4.9□□□□□ -1.63
SSU72P53538 HAP3YBL021C 435 nt4.9□□□□□ -1.63
SSU72P53538 NPT1YOR209C 1290 nt4.9□□□□□ -1.63
SSU72P53538 FRS2YFL022C 1512 nt4.9□□□□□ -1.63
SSU72P53538 PMT2YAL023C 2280 nt4.9□□□□□ -1.63
SSU72P53538 STE20YHL007C 2820 nt4.9□□□□□ -1.63
SSU72P53538 DPH2YKL191W 1605 nt4.9□□□□□ -1.63
SSU72P53538 NUP1YOR098C 3231 nt4.89□□□□□ -1.63
SSU72P53538 RPE1YJL121C 717 nt4.89□□□□□ -1.63
SSU72P53538 EFM3YJR129C 1020 nt4.89□□□□□ -1.63
SSU72P53538 YPR114WYPR114W 948 nt4.89□□□□□ -1.63
SSU72P53538 TOS3YGL179C 1683 nt4.89□□□□□ -1.63
SSU72P53538 ELP2YGR200C 2367 nt4.89□□□□□ -1.63
SSU72P53538 YEF1YEL041W 1488 nt4.88□□□□□ -1.63
SSU72P53538 HVG1YER039C 750 nt4.88□□□□□ -1.63
SSU72P53538 MSP1YGR028W 1089 nt4.88□□□□□ -1.63
SSU72P53538 DRE2YKR071C 1047 nt4.88□□□□□ -1.63
SSU72P53538 YMR030W-AYMR030W-A 291 nt4.88□□□□□ -1.63
SSU72P53538 GRE1YPL223C 507 nt4.88□□□□□ -1.63
SSU72P53538 FHL1YPR104C 2811 nt4.88□□□□□ -1.63
SSU72P53538 ICL1YER065C 1674 nt4.87□□□□□ -1.63
SSU72P53538 RRP9YPR137W 1722 nt4.87□□□□□ -1.63
SSU72P53538 SCS2YER120W 735 nt4.87□□□□□ -1.63
SSU72P53538 HAP2YGL237C 798 nt4.87□□□□□ -1.63
SSU72P53538 tR(ACG)DtR(ACG)D 73 nt4.87□□□□□ -1.63
SSU72P53538 tR(ACG)EtR(ACG)E 73 nt4.87□□□□□ -1.63
SSU72P53538 tR(ACG)KtR(ACG)K 73 nt4.87□□□□□ -1.63
SSU72P53538 tR(ACG)LtR(ACG)L 73 nt4.87□□□□□ -1.63
SSU72P53538 tR(ACG)OtR(ACG)O 73 nt4.87□□□□□ -1.63
SSU72P53538 RMA1YKL132C 1293 nt4.87□□□□□ -1.63
SSU72P53538 CSR1YLR380W 1227 nt4.87□□□□□ -1.63
SSU72P53538 PPG1YNR032W 1107 nt4.87□□□□□ -1.63
SSU72P53538 YPL062WYPL062W 405 nt4.87□□□□□ -1.63
SSU72P53538 HPC2YBR215W 1878 nt4.87□□□□□ -1.63
SSU72P53538 GIP2YER054C 1647 nt4.86□□□□□ -1.63
SSU72P53538 TBF1YPL128C 1689 nt4.86□□□□□ -1.63
SSU72P53538 RPN11YFR004W 921 nt4.86□□□□□ -1.63
SSU72P53538 YHR193C-AYHR193C-A 375 nt4.86□□□□□ -1.63
SSU72P53538 RPL10YLR075W 666 nt4.86□□□□□ -1.63
SSU72P53538 VMA4YOR332W 702 nt4.86□□□□□ -1.63
SSU72P53538 PMA1YGL008C 2757 nt4.86□□□□□ -1.63
SSU72P53538 MDM31YHR194W 1740 nt4.86□□□□□ -1.63
SSU72P53538 FAA3YIL009W 2085 nt4.85□□□□□ -1.63
SSU72P53538 YDL129WYDL129W 876 nt4.85□□□□□ -1.63
SSU72P53538 YDL218WYDL218W 954 nt4.85□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms