Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CX3CR1P49238 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CX3CR1P49238 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CX3CR1P49238 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CX3CR1P49238 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CX3CR1P49238 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CX3CR1P49238 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CX3CR1P49238 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CX3CR1P49238 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CX3CR1P49238 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.66■□□□□ 0.9
CX3CR1P49238 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CX3CR1P49238 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.65■□□□□ 0.9
CX3CR1P49238 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CX3CR1P49238 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.65■□□□□ 0.9
CX3CR1P49238 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.65■□□□□ 0.9
CX3CR1P49238 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.65■□□□□ 0.9
CX3CR1P49238 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CX3CR1P49238 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CX3CR1P49238 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CX3CR1P49238 RNF126P1-201ENST00000567452 1320 ntBASIC20.64■□□□□ 0.89
CX3CR1P49238 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CX3CR1P49238 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CX3CR1P49238 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CX3CR1P49238 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
CX3CR1P49238 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CX3CR1P49238 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.63■□□□□ 0.89
CX3CR1P49238 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.62■□□□□ 0.89
CX3CR1P49238 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CX3CR1P49238 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.62■□□□□ 0.89
CX3CR1P49238 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CX3CR1P49238 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CX3CR1P49238 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CX3CR1P49238 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.62■□□□□ 0.89
CX3CR1P49238 AC009831.1-201ENST00000580420 1582 ntBASIC20.62■□□□□ 0.89
CX3CR1P49238 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CX3CR1P49238 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.61■□□□□ 0.89
CX3CR1P49238 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CX3CR1P49238 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CX3CR1P49238 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CX3CR1P49238 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CX3CR1P49238 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CX3CR1P49238 KRT18P10-201ENST00000388836 1287 ntBASIC20.6■□□□□ 0.89
CX3CR1P49238 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CX3CR1P49238 AC133552.2-201ENST00000619106 1032 ntBASIC20.6■□□□□ 0.89
CX3CR1P49238 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.59■□□□□ 0.89
CX3CR1P49238 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.59■□□□□ 0.89
CX3CR1P49238 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.59■□□□□ 0.89
CX3CR1P49238 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CX3CR1P49238 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.59■□□□□ 0.89
CX3CR1P49238 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CX3CR1P49238 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CX3CR1P49238 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CX3CR1P49238 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.58■□□□□ 0.89
CX3CR1P49238 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CX3CR1P49238 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.57■□□□□ 0.88
CX3CR1P49238 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CX3CR1P49238 LINC01124-201ENST00000409786 2117 ntBASIC20.57■□□□□ 0.88
CX3CR1P49238 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CX3CR1P49238 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CX3CR1P49238 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.56■□□□□ 0.88
CX3CR1P49238 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.56■□□□□ 0.88
CX3CR1P49238 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
CX3CR1P49238 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CX3CR1P49238 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CX3CR1P49238 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.55■□□□□ 0.88
CX3CR1P49238 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CX3CR1P49238 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 321.9 ms