Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HNF4AP41235 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
HNF4AP41235 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
HNF4AP41235 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HNF4AP41235 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.82■■□□□ 1.24
HNF4AP41235 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
HNF4AP41235 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HNF4AP41235 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HNF4AP41235 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HNF4AP41235 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
HNF4AP41235 AP003733.4-201ENST00000623785 1697 ntBASIC22.81■■□□□ 1.24
HNF4AP41235 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HNF4AP41235 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.81■■□□□ 1.24
HNF4AP41235 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.81■■□□□ 1.24
HNF4AP41235 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.81■■□□□ 1.24
HNF4AP41235 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
HNF4AP41235 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HNF4AP41235 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HNF4AP41235 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HNF4AP41235 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HNF4AP41235 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HNF4AP41235 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HNF4AP41235 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.79■■□□□ 1.24
HNF4AP41235 MIR6765-201ENST00000614092 87 ntBASIC22.79■■□□□ 1.24
HNF4AP41235 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HNF4AP41235 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.79■■□□□ 1.24
HNF4AP41235 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HNF4AP41235 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HNF4AP41235 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
HNF4AP41235 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HNF4AP41235 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HNF4AP41235 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HNF4AP41235 AC004987.1-201ENST00000428627 508 ntBASIC22.77■■□□□ 1.24
HNF4AP41235 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.77■■□□□ 1.24
HNF4AP41235 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.77■■□□□ 1.24
HNF4AP41235 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.77■■□□□ 1.24
HNF4AP41235 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
HNF4AP41235 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
HNF4AP41235 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.76■■□□□ 1.23
HNF4AP41235 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.76■■□□□ 1.23
HNF4AP41235 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
HNF4AP41235 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.76■■□□□ 1.23
HNF4AP41235 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HNF4AP41235 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
HNF4AP41235 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HNF4AP41235 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.75■■□□□ 1.23
HNF4AP41235 ATP5G2P3-201ENST00000429083 425 ntBASIC22.75■■□□□ 1.23
HNF4AP41235 AC012354.3-201ENST00000623734 483 ntBASIC22.75■■□□□ 1.23
HNF4AP41235 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.75■■□□□ 1.23
HNF4AP41235 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HNF4AP41235 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.74■■□□□ 1.23
HNF4AP41235 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HNF4AP41235 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HNF4AP41235 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HNF4AP41235 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HNF4AP41235 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HNF4AP41235 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
HNF4AP41235 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
HNF4AP41235 AL033527.3-201ENST00000566366 1196 ntBASIC22.73■■□□□ 1.23
HNF4AP41235 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
HNF4AP41235 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.73■■□□□ 1.23
HNF4AP41235 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.73■■□□□ 1.23
HNF4AP41235 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
HNF4AP41235 MIR6089-201ENST00000616698 64 ntBASIC22.72■■□□□ 1.23
HNF4AP41235 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HNF4AP41235 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
HNF4AP41235 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.72■■□□□ 1.23
HNF4AP41235 AL139125.2-201ENST00000623134 1869 ntBASIC22.72■■□□□ 1.23
HNF4AP41235 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.71■■□□□ 1.23
HNF4AP41235 FOXO3B-201ENST00000395675 1928 ntBASIC22.71■■□□□ 1.23
HNF4AP41235 RPS2P7-201ENST00000447334 885 ntBASIC22.71■■□□□ 1.23
HNF4AP41235 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.71■■□□□ 1.23
HNF4AP41235 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
HNF4AP41235 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.71■■□□□ 1.23
HNF4AP41235 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.71■■□□□ 1.23
HNF4AP41235 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.71■■□□□ 1.23
HNF4AP41235 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.71■■□□□ 1.23
HNF4AP41235 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HNF4AP41235 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
HNF4AP41235 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.7■■□□□ 1.23
HNF4AP41235 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
HNF4AP41235 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 TSPY13P-201ENST00000338964 914 ntBASIC22.7■■□□□ 1.22
HNF4AP41235 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.7■■□□□ 1.22
HNF4AP41235 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.7■■□□□ 1.22
HNF4AP41235 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
HNF4AP41235 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HNF4AP41235 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms