Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 PCS60YBR222C 1632 nt5.9□□□□□ -1.46
TDP1P38319 GCV3YAL044C 513 nt5.9□□□□□ -1.46
TDP1P38319 MTQ1YNL063W 945 nt5.9□□□□□ -1.46
TDP1P38319 HEM15YOR176W 1182 nt5.9□□□□□ -1.46
TDP1P38319 GLN1YPR035W 1113 nt5.9□□□□□ -1.46
TDP1P38319 TEL2YGR099W 2067 nt5.9□□□□□ -1.47
TDP1P38319 SDH4YDR178W 546 nt5.89□□□□□ -1.47
TDP1P38319 tR(ACG)DtR(ACG)D 73 nt5.89□□□□□ -1.47
TDP1P38319 tR(ACG)EtR(ACG)E 73 nt5.89□□□□□ -1.47
TDP1P38319 tR(ACG)KtR(ACG)K 73 nt5.89□□□□□ -1.47
TDP1P38319 tR(ACG)LtR(ACG)L 73 nt5.89□□□□□ -1.47
TDP1P38319 tR(ACG)OtR(ACG)O 73 nt5.89□□□□□ -1.47
TDP1P38319 YKR104WYKR104W 921 nt5.89□□□□□ -1.47
TDP1P38319 IMD1YAR073W 1212 nt5.89□□□□□ -1.47
TDP1P38319 MRPS12YNR036C 462 nt5.89□□□□□ -1.47
TDP1P38319 YOL107WYOL107W 1029 nt5.89□□□□□ -1.47
TDP1P38319 MED4YOR174W 855 nt5.89□□□□□ -1.47
TDP1P38319 YBR027CYBR027C 333 nt5.89□□□□□ -1.47
TDP1P38319 IFA38YBR159W 1044 nt5.89□□□□□ -1.47
TDP1P38319 FRS2YFL022C 1512 nt5.89□□□□□ -1.47
TDP1P38319 WHI4YDL224C 1950 nt5.88□□□□□ -1.47
TDP1P38319 KRE9YJL174W 831 nt5.88□□□□□ -1.47
TDP1P38319 UBS1YBR165W 834 nt5.88□□□□□ -1.47
TDP1P38319 SUB2YDL084W 1341 nt5.88□□□□□ -1.47
TDP1P38319 UIP5YKR044W 1332 nt5.88□□□□□ -1.47
TDP1P38319 CLB1YGR108W 1416 nt5.88□□□□□ -1.47
TDP1P38319 KEX2YNL238W 2445 nt5.88□□□□□ -1.47
TDP1P38319 CRZ1YNL027W 2037 nt5.87□□□□□ -1.47
TDP1P38319 SCT1YBL011W 2280 nt5.87□□□□□ -1.47
TDP1P38319 YCR006CYCR006C 474 nt5.87□□□□□ -1.47
TDP1P38319 snR57snR57 88 nt5.87□□□□□ -1.47
TDP1P38319 YHR054CYHR054C 1065 nt5.87□□□□□ -1.47
TDP1P38319 BCY1YIL033C 1251 nt5.87□□□□□ -1.47
TDP1P38319 YIR043CYIR043C 693 nt5.87□□□□□ -1.47
TDP1P38319 YLR198CYLR198C 360 nt5.87□□□□□ -1.47
TDP1P38319 MRP51YPL118W 1035 nt5.87□□□□□ -1.47
TDP1P38319 IVY1YDR229W 1362 nt5.87□□□□□ -1.47
TDP1P38319 ZWF1YNL241C 1518 nt5.87□□□□□ -1.47
TDP1P38319 PYC1YGL062W 3537 nt5.87□□□□□ -1.47
TDP1P38319 MUM3YOR298W 1440 nt5.86□□□□□ -1.47
TDP1P38319 CDC34YDR054C 888 nt5.86□□□□□ -1.47
TDP1P38319 CUP2YGL166W 678 nt5.86□□□□□ -1.47
TDP1P38319 YGR066CYGR066C 879 nt5.86□□□□□ -1.47
TDP1P38319 YGR283CYGR283C 1026 nt5.86□□□□□ -1.47
TDP1P38319 FSH1YHR049W 732 nt5.86□□□□□ -1.47
TDP1P38319 SUP2tY(GUA)D 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP11tY(GUA)F1 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP6tY(GUA)F2 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP7tY(GUA)J1 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP4tY(GUA)J2 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP5tY(GUA)M1 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP8tY(GUA)M2 75 nt5.86□□□□□ -1.47
TDP1P38319 SUP3tY(GUA)O 75 nt5.86□□□□□ -1.47
TDP1P38319 YMR252CYMR252C 405 nt5.86□□□□□ -1.47
TDP1P38319 SIT1YEL065W 1887 nt5.85□□□□□ -1.47
TDP1P38319 Q0255Q0255 1419 nt5.85□□□□□ -1.47
TDP1P38319 HST3YOR025W 1344 nt5.85□□□□□ -1.47
TDP1P38319 SRG1SRG1 551 nt5.85□□□□□ -1.47
TDP1P38319 RMD5YDR255C 1266 nt5.85□□□□□ -1.47
TDP1P38319 YHL044WYHL044W 708 nt5.85□□□□□ -1.47
TDP1P38319 ECM14YHR132C 1293 nt5.85□□□□□ -1.47
TDP1P38319 RHO4YKR055W 876 nt5.85□□□□□ -1.47
TDP1P38319 DRE2YKR071C 1047 nt5.85□□□□□ -1.47
TDP1P38319 PSR2YLR019W 1194 nt5.85□□□□□ -1.47
TDP1P38319 LIP2YLR239C 987 nt5.85□□□□□ -1.47
TDP1P38319 RRS1YOR294W 612 nt5.85□□□□□ -1.47
TDP1P38319 PRM4YPL156C 855 nt5.85□□□□□ -1.47
TDP1P38319 NHP6BYBR089C-A 300 nt5.85□□□□□ -1.47
TDP1P38319 RTG3YBL103C 1461 nt5.84□□□□□ -1.47
TDP1P38319 PTK2YJR059W 2457 nt5.84□□□□□ -1.47
TDP1P38319 HMLALPHA1YCL066W 528 nt5.84□□□□□ -1.47
TDP1P38319 MATALPHA1YCR040W 528 nt5.84□□□□□ -1.47
TDP1P38319 TRP4YDR354W 1143 nt5.84□□□□□ -1.47
TDP1P38319 YGL188CYGL188C 174 nt5.84□□□□□ -1.47
TDP1P38319 YNR040WYNR040W 771 nt5.84□□□□□ -1.47
TDP1P38319 TIP41YPR040W 1071 nt5.84□□□□□ -1.47
TDP1P38319 YLL067CYLL067C 3618 nt5.84□□□□□ -1.48
TDP1P38319 RAD3YER171W 2337 nt5.83□□□□□ -1.48
TDP1P38319 HSP104YLL026W 2727 nt5.83□□□□□ -1.48
TDP1P38319 SRP101YDR292C 1866 nt5.83□□□□□ -1.48
TDP1P38319 SEC18YBR080C 2277 nt5.83□□□□□ -1.48
TDP1P38319 AMA1YGR225W 1782 nt5.83□□□□□ -1.48
TDP1P38319 PHO92YDR374C 921 nt5.83□□□□□ -1.48
TDP1P38319 YGR011WYGR011W 327 nt5.83□□□□□ -1.48
TDP1P38319 RRT7YLL030C 342 nt5.83□□□□□ -1.48
TDP1P38319 RPL10YLR075W 666 nt5.83□□□□□ -1.48
TDP1P38319 TAL1YLR354C 1008 nt5.83□□□□□ -1.48
TDP1P38319 TSA1YML028W 591 nt5.83□□□□□ -1.48
TDP1P38319 YML131WYML131W 1098 nt5.83□□□□□ -1.48
TDP1P38319 YNL303WYNL303W 348 nt5.83□□□□□ -1.48
TDP1P38319 YOL038C-AYOL038C-A 96 nt5.83□□□□□ -1.48
TDP1P38319 RDL2YOR286W 450 nt5.83□□□□□ -1.48
TDP1P38319 GPB2YAL056W 2643 nt5.83□□□□□ -1.48
TDP1P38319 MSS1YMR023C 1581 nt5.83□□□□□ -1.48
TDP1P38319 RVB2YPL235W 1416 nt5.82□□□□□ -1.48
TDP1P38319 MDM31YHR194W 1740 nt5.82□□□□□ -1.48
TDP1P38319 YDR187CYDR187C 519 nt5.82□□□□□ -1.48
TDP1P38319 RTT103YDR289C 1230 nt5.82□□□□□ -1.48
TDP1P38319 YEL068CYEL068C 333 nt5.82□□□□□ -1.48
TDP1P38319 MPC2YHR162W 390 nt5.82□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms