Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.13■□□□□ 0.97
SDHAP31040 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.12■□□□□ 0.97
SDHAP31040 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.12■□□□□ 0.97
SDHAP31040 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAP31040 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAP31040 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.12■□□□□ 0.97
SDHAP31040 MIR6089-201ENST00000616698 64 ntBASIC21.12■□□□□ 0.97
SDHAP31040 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SDHAP31040 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAP31040 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.12■□□□□ 0.97
SDHAP31040 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SDHAP31040 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.11■□□□□ 0.97
SDHAP31040 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAP31040 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAP31040 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAP31040 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAP31040 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAP31040 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.11■□□□□ 0.97
SDHAP31040 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SDHAP31040 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.1■□□□□ 0.97
SDHAP31040 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAP31040 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDHAP31040 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDHAP31040 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
SDHAP31040 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDHAP31040 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SDHAP31040 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SDHAP31040 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDHAP31040 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SDHAP31040 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SDHAP31040 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.08■□□□□ 0.97
SDHAP31040 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.96
SDHAP31040 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDHAP31040 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAP31040 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAP31040 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAP31040 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAP31040 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAP31040 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAP31040 RNF126P1-201ENST00000567452 1320 ntBASIC21.06■□□□□ 0.96
SDHAP31040 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.06■□□□□ 0.96
SDHAP31040 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SDHAP31040 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.06■□□□□ 0.96
SDHAP31040 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAP31040 AC009831.1-201ENST00000580420 1582 ntBASIC21.06■□□□□ 0.96
SDHAP31040 AC141586.4-201ENST00000624558 1573 ntBASIC21.06■□□□□ 0.96
SDHAP31040 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDHAP31040 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDHAP31040 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDHAP31040 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.05■□□□□ 0.96
SDHAP31040 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.05■□□□□ 0.96
SDHAP31040 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDHAP31040 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAP31040 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.04■□□□□ 0.96
SDHAP31040 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.04■□□□□ 0.96
SDHAP31040 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAP31040 FOXO3B-201ENST00000395675 1928 ntBASIC21.04■□□□□ 0.96
SDHAP31040 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.04■□□□□ 0.96
SDHAP31040 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAP31040 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDHAP31040 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDHAP31040 AC133552.2-201ENST00000619106 1032 ntBASIC21.03■□□□□ 0.96
SDHAP31040 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SDHAP31040 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
SDHAP31040 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.03■□□□□ 0.96
SDHAP31040 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SDHAP31040 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDHAP31040 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDHAP31040 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SDHAP31040 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDHAP31040 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SDHAP31040 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.02■□□□□ 0.96
SDHAP31040 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SDHAP31040 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.01■□□□□ 0.95
SDHAP31040 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SDHAP31040 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SDHAP31040 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SDHAP31040 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SDHAP31040 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SDHAP31040 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SDHAP31040 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21■□□□□ 0.95
SDHAP31040 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SDHAP31040 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
SDHAP31040 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms