Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.3■■□□□ 1.96
COL11A1P12107 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.3■■□□□ 1.96
COL11A1P12107 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
COL11A1P12107 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A1P12107 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A1P12107 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.29■■□□□ 1.96
COL11A1P12107 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL11A1P12107 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL11A1P12107 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.28■■□□□ 1.96
COL11A1P12107 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.28■■□□□ 1.96
COL11A1P12107 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL11A1P12107 AF131216.4-201ENST00000638924 1588 ntBASIC27.28■■□□□ 1.96
COL11A1P12107 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL11A1P12107 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A1P12107 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.27■■□□□ 1.96
COL11A1P12107 AC008406.3-201ENST00000620001 1374 ntBASIC27.27■■□□□ 1.96
COL11A1P12107 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A1P12107 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.27■■□□□ 1.96
COL11A1P12107 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.27■■□□□ 1.96
COL11A1P12107 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A1P12107 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
COL11A1P12107 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.26■■□□□ 1.95
COL11A1P12107 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A1P12107 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.25■■□□□ 1.95
COL11A1P12107 AL117332.1-201ENST00000622628 974 ntBASIC27.25■■□□□ 1.95
COL11A1P12107 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A1P12107 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A1P12107 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.25■■□□□ 1.95
COL11A1P12107 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A1P12107 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.24■■□□□ 1.95
COL11A1P12107 MTDHP2-201ENST00000601468 714 ntBASIC27.23■■□□□ 1.95
COL11A1P12107 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A1P12107 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A1P12107 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.23■■□□□ 1.95
COL11A1P12107 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
COL11A1P12107 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.23■■□□□ 1.95
COL11A1P12107 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.22■■□□□ 1.95
COL11A1P12107 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
COL11A1P12107 MIR6724-1-201ENST00000616420 92 ntBASIC27.22■■□□□ 1.95
COL11A1P12107 MIR6724-2-201ENST00000616483 92 ntBASIC27.22■■□□□ 1.95
COL11A1P12107 MIR6724-4-201ENST00000617390 92 ntBASIC27.22■■□□□ 1.95
COL11A1P12107 MIR6724-3-201ENST00000622482 92 ntBASIC27.22■■□□□ 1.95
COL11A1P12107 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A1P12107 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
COL11A1P12107 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.2■■□□□ 1.95
COL11A1P12107 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.2■■□□□ 1.95
COL11A1P12107 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.2■■□□□ 1.95
COL11A1P12107 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A1P12107 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.2■■□□□ 1.95
COL11A1P12107 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A1P12107 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.2■■□□□ 1.95
COL11A1P12107 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL11A1P12107 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
COL11A1P12107 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
COL11A1P12107 FOXO3B-201ENST00000395675 1928 ntBASIC27.19■■□□□ 1.94
COL11A1P12107 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A1P12107 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A1P12107 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.19■■□□□ 1.94
COL11A1P12107 AL512631.2-201ENST00000604634 923 ntBASIC27.19■■□□□ 1.94
COL11A1P12107 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A1P12107 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A1P12107 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 SNX5-217ENST00000606557 1087 ntBASIC27.18■■□□□ 1.94
COL11A1P12107 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.18■■□□□ 1.94
COL11A1P12107 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A1P12107 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.18■■□□□ 1.94
COL11A1P12107 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.18■■□□□ 1.94
COL11A1P12107 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL11A1P12107 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
COL11A1P12107 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.17■■□□□ 1.94
COL11A1P12107 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
COL11A1P12107 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.17■■□□□ 1.94
COL11A1P12107 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A1P12107 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.16■■□□□ 1.94
COL11A1P12107 MIR4466-201ENST00000606121 54 ntBASIC27.16■■□□□ 1.94
COL11A1P12107 AC010997.5-201ENST00000609182 354 ntBASIC27.16■■□□□ 1.94
COL11A1P12107 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
COL11A1P12107 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.16■■□□□ 1.94
COL11A1P12107 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A1P12107 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A1P12107 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A1P12107 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A1P12107 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.16■■□□□ 1.94
COL11A1P12107 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
COL11A1P12107 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL11A1P12107 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A1P12107 AC097639.1-201ENST00000565519 1891 ntBASIC27.15■■□□□ 1.94
COL11A1P12107 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A1P12107 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A1P12107 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A1P12107 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A1P12107 AC010501.1-201ENST00000606270 1962 ntBASIC27.14■■□□□ 1.94
COL11A1P12107 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.14■■□□□ 1.94
COL11A1P12107 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL11A1P12107 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
COL11A1P12107 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms