Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
HOXC6P09630 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.04■■□□□ 1.92
HOXC6P09630 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
HOXC6P09630 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HOXC6P09630 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HOXC6P09630 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HOXC6P09630 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.03■■□□□ 1.92
HOXC6P09630 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
HOXC6P09630 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.03■■□□□ 1.92
HOXC6P09630 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
HOXC6P09630 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HOXC6P09630 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.02■■□□□ 1.92
HOXC6P09630 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.02■■□□□ 1.92
HOXC6P09630 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
HOXC6P09630 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
HOXC6P09630 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.02■■□□□ 1.92
HOXC6P09630 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.92
HOXC6P09630 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
HOXC6P09630 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.01■■□□□ 1.91
HOXC6P09630 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
HOXC6P09630 AC133561.4-201ENST00000566112 224 ntBASIC27.01■■□□□ 1.91
HOXC6P09630 AL512631.2-201ENST00000604634 923 ntBASIC27.01■■□□□ 1.91
HOXC6P09630 AC005837.3-201ENST00000612163 286 ntBASIC27.01■■□□□ 1.91
HOXC6P09630 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27■■□□□ 1.91
HOXC6P09630 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27■■□□□ 1.91
HOXC6P09630 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27■■□□□ 1.91
HOXC6P09630 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27■■□□□ 1.91
HOXC6P09630 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27■■□□□ 1.91
HOXC6P09630 AC096631.2-201ENST00000436136 790 ntBASIC26.99■■□□□ 1.91
HOXC6P09630 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
HOXC6P09630 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.99■■□□□ 1.91
HOXC6P09630 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
HOXC6P09630 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
HOXC6P09630 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
HOXC6P09630 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.98■■□□□ 1.91
HOXC6P09630 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
HOXC6P09630 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
HOXC6P09630 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
HOXC6P09630 AF131216.4-201ENST00000638924 1588 ntBASIC26.97■■□□□ 1.91
HOXC6P09630 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.97■■□□□ 1.91
HOXC6P09630 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
HOXC6P09630 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.96■■□□□ 1.91
HOXC6P09630 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
HOXC6P09630 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.96■■□□□ 1.91
HOXC6P09630 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.96■■□□□ 1.91
HOXC6P09630 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.96■■□□□ 1.91
HOXC6P09630 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
HOXC6P09630 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
HOXC6P09630 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
HOXC6P09630 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
HOXC6P09630 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.94■■□□□ 1.9
HOXC6P09630 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
HOXC6P09630 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HOXC6P09630 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.93■■□□□ 1.9
HOXC6P09630 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HOXC6P09630 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HOXC6P09630 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HOXC6P09630 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HOXC6P09630 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.92■■□□□ 1.9
HOXC6P09630 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.92■■□□□ 1.9
HOXC6P09630 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.92■■□□□ 1.9
HOXC6P09630 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.92■■□□□ 1.9
HOXC6P09630 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HOXC6P09630 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HOXC6P09630 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.91■■□□□ 1.9
HOXC6P09630 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
HOXC6P09630 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HOXC6P09630 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HOXC6P09630 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HOXC6P09630 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.9■■□□□ 1.9
HOXC6P09630 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.9■■□□□ 1.9
HOXC6P09630 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HOXC6P09630 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HOXC6P09630 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HOXC6P09630 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HOXC6P09630 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HOXC6P09630 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
HOXC6P09630 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.88■■□□□ 1.89
HOXC6P09630 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.88■■□□□ 1.89
HOXC6P09630 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HOXC6P09630 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HOXC6P09630 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
HOXC6P09630 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HOXC6P09630 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HOXC6P09630 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.86■■□□□ 1.89
HOXC6P09630 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.86■■□□□ 1.89
HOXC6P09630 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.86■■□□□ 1.89
HOXC6P09630 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
HOXC6P09630 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
HOXC6P09630 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HOXC6P09630 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HOXC6P09630 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.85■■□□□ 1.89
HOXC6P09630 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.85■■□□□ 1.89
HOXC6P09630 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
HOXC6P09630 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
HOXC6P09630 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.84■■□□□ 1.89
HOXC6P09630 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HOXC6P09630 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HOXC6P09630 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HOXC6P09630 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms