Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHRNA1P02708 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26■■□□□ 1.75
CHRNA1P02708 AC010997.5-201ENST00000609182 354 ntBASIC26■■□□□ 1.75
CHRNA1P02708 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CHRNA1P02708 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26■■□□□ 1.75
CHRNA1P02708 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHRNA1P02708 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.99■■□□□ 1.75
CHRNA1P02708 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHRNA1P02708 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.99■■□□□ 1.75
CHRNA1P02708 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CHRNA1P02708 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.99■■□□□ 1.75
CHRNA1P02708 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CHRNA1P02708 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CHRNA1P02708 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.98■■□□□ 1.75
CHRNA1P02708 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.98■■□□□ 1.75
CHRNA1P02708 AC131281.2-201ENST00000520478 145 ntBASIC25.98■■□□□ 1.75
CHRNA1P02708 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.98■■□□□ 1.75
CHRNA1P02708 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHRNA1P02708 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.97■■□□□ 1.75
CHRNA1P02708 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHRNA1P02708 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHRNA1P02708 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHRNA1P02708 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.97■■□□□ 1.75
CHRNA1P02708 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.97■■□□□ 1.75
CHRNA1P02708 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.97■■□□□ 1.75
CHRNA1P02708 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.97■■□□□ 1.75
CHRNA1P02708 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.97■■□□□ 1.75
CHRNA1P02708 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.97■■□□□ 1.75
CHRNA1P02708 FOXO3B-201ENST00000395675 1928 ntBASIC25.96■■□□□ 1.75
CHRNA1P02708 AF131216.4-201ENST00000638924 1588 ntBASIC25.96■■□□□ 1.75
CHRNA1P02708 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHRNA1P02708 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.96■■□□□ 1.75
CHRNA1P02708 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.96■■□□□ 1.75
CHRNA1P02708 AL117332.1-201ENST00000622628 974 ntBASIC25.96■■□□□ 1.75
CHRNA1P02708 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHRNA1P02708 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CHRNA1P02708 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.95■■□□□ 1.74
CHRNA1P02708 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.95■■□□□ 1.74
CHRNA1P02708 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
CHRNA1P02708 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHRNA1P02708 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
CHRNA1P02708 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.94■■□□□ 1.74
CHRNA1P02708 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.94■■□□□ 1.74
CHRNA1P02708 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHRNA1P02708 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.94■■□□□ 1.74
CHRNA1P02708 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.94■■□□□ 1.74
CHRNA1P02708 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.94■■□□□ 1.74
CHRNA1P02708 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHRNA1P02708 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHRNA1P02708 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHRNA1P02708 MIR3621-201ENST00000580529 85 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 MTDHP2-201ENST00000601468 714 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 MIR6724-1-201ENST00000616420 92 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 MIR6724-2-201ENST00000616483 92 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 MIR6724-4-201ENST00000617390 92 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 MIR6724-3-201ENST00000622482 92 ntBASIC25.93■■□□□ 1.74
CHRNA1P02708 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.93■■□□□ 1.74
CHRNA1P02708 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHRNA1P02708 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHRNA1P02708 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.92■■□□□ 1.74
CHRNA1P02708 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHRNA1P02708 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHRNA1P02708 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHRNA1P02708 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHRNA1P02708 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.91■■□□□ 1.74
CHRNA1P02708 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.91■■□□□ 1.74
CHRNA1P02708 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.91■■□□□ 1.74
CHRNA1P02708 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHRNA1P02708 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.9■■□□□ 1.74
CHRNA1P02708 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.9■■□□□ 1.74
CHRNA1P02708 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.9■■□□□ 1.74
CHRNA1P02708 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHRNA1P02708 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHRNA1P02708 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.89■■□□□ 1.74
CHRNA1P02708 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
CHRNA1P02708 MIR638-201ENST00000385237 100 ntBASIC25.89■■□□□ 1.74
CHRNA1P02708 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CHRNA1P02708 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.89■■□□□ 1.74
CHRNA1P02708 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHRNA1P02708 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHRNA1P02708 ERN1-208ENST00000606895 2068 ntBASIC25.88■■□□□ 1.73
CHRNA1P02708 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHRNA1P02708 AC096887.2-201ENST00000623443 1957 ntBASIC25.88■■□□□ 1.73
CHRNA1P02708 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHRNA1P02708 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHRNA1P02708 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.88■■□□□ 1.73
CHRNA1P02708 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.88■■□□□ 1.73
CHRNA1P02708 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CHRNA1P02708 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHRNA1P02708 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CHRNA1P02708 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
CHRNA1P02708 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHRNA1P02708 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms