Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1P01909 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1P01909 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1P01909 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.66■□□□□ 0.42
HLA-DQA1P01909 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 C9orf163-202ENST00000624034 2573 ntBASIC17.66■□□□□ 0.42
HLA-DQA1P01909 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1P01909 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1P01909 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DQA1P01909 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.64■□□□□ 0.42
HLA-DQA1P01909 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 LINC00565-201ENST00000562710 2331 ntBASIC17.64■□□□□ 0.41
HLA-DQA1P01909 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 MIR762-201ENST00000390236 83 ntBASIC17.64■□□□□ 0.41
HLA-DQA1P01909 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.64■□□□□ 0.41
HLA-DQA1P01909 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1P01909 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1P01909 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1P01909 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1P01909 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA1P01909 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQA1P01909 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA1P01909 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA1P01909 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQA1P01909 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 ABCB10P4-201ENST00000566803 2184 ntBASIC17.59■□□□□ 0.41
HLA-DQA1P01909 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 AC005559.1-201ENST00000589661 871 ntBASIC17.59■□□□□ 0.41
HLA-DQA1P01909 AL024507.2-201ENST00000606070 2574 ntBASIC17.59■□□□□ 0.41
HLA-DQA1P01909 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 AC233723.2-201ENST00000623798 2106 ntBASIC17.59■□□□□ 0.41
HLA-DQA1P01909 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA1P01909 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DQA1P01909 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQA1P01909 AC004812.2-201ENST00000611079 2094 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms