Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NKX2-2O95096 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.86■■□□□ 1.09
NKX2-2O95096 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.86■■□□□ 1.09
NKX2-2O95096 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.86■■□□□ 1.09
NKX2-2O95096 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NKX2-2O95096 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NKX2-2O95096 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NKX2-2O95096 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NKX2-2O95096 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NKX2-2O95096 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NKX2-2O95096 MIR6089-201ENST00000616698 64 ntBASIC21.85■■□□□ 1.09
NKX2-2O95096 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
NKX2-2O95096 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NKX2-2O95096 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX2-2O95096 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NKX2-2O95096 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NKX2-2O95096 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX2-2O95096 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NKX2-2O95096 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
NKX2-2O95096 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.84■■□□□ 1.09
NKX2-2O95096 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NKX2-2O95096 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.84■■□□□ 1.09
NKX2-2O95096 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.84■■□□□ 1.09
NKX2-2O95096 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.84■■□□□ 1.09
NKX2-2O95096 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NKX2-2O95096 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NKX2-2O95096 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NKX2-2O95096 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.83■■□□□ 1.09
NKX2-2O95096 AC004987.1-201ENST00000428627 508 ntBASIC21.83■■□□□ 1.09
NKX2-2O95096 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NKX2-2O95096 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.83■■□□□ 1.09
NKX2-2O95096 DUX4L18-201ENST00000553347 1267 ntBASIC21.83■■□□□ 1.09
NKX2-2O95096 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX2-2O95096 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NKX2-2O95096 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX2-2O95096 ATP5G2P3-201ENST00000429083 425 ntBASIC21.82■■□□□ 1.08
NKX2-2O95096 LONRF2P2-201ENST00000439212 571 ntBASIC21.82■■□□□ 1.08
NKX2-2O95096 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.82■■□□□ 1.08
NKX2-2O95096 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.82■■□□□ 1.08
NKX2-2O95096 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NKX2-2O95096 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NKX2-2O95096 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX2-2O95096 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.81■■□□□ 1.08
NKX2-2O95096 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX2-2O95096 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX2-2O95096 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX2-2O95096 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.81■■□□□ 1.08
NKX2-2O95096 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.81■■□□□ 1.08
NKX2-2O95096 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NKX2-2O95096 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NKX2-2O95096 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NKX2-2O95096 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.8■■□□□ 1.08
NKX2-2O95096 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.8■■□□□ 1.08
NKX2-2O95096 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NKX2-2O95096 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NKX2-2O95096 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NKX2-2O95096 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NKX2-2O95096 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NKX2-2O95096 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NKX2-2O95096 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NKX2-2O95096 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NKX2-2O95096 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NKX2-2O95096 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NKX2-2O95096 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX2-2O95096 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.78■■□□□ 1.08
NKX2-2O95096 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.78■■□□□ 1.08
NKX2-2O95096 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX2-2O95096 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX2-2O95096 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NKX2-2O95096 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NKX2-2O95096 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 TSPY13P-201ENST00000338964 914 ntBASIC21.77■■□□□ 1.08
NKX2-2O95096 AL592295.1-201ENST00000400984 884 ntBASIC21.77■■□□□ 1.08
NKX2-2O95096 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-2O95096 AC012354.3-201ENST00000623734 483 ntBASIC21.77■■□□□ 1.08
NKX2-2O95096 AL139125.2-201ENST00000623134 1869 ntBASIC21.77■■□□□ 1.08
NKX2-2O95096 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NKX2-2O95096 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NKX2-2O95096 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.77■■□□□ 1.07
NKX2-2O95096 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NKX2-2O95096 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NKX2-2O95096 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-2O95096 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NKX2-2O95096 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-2O95096 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-2O95096 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-2O95096 AC139795.1-202ENST00000500444 432 ntBASIC21.76■■□□□ 1.07
NKX2-2O95096 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.76■■□□□ 1.07
NKX2-2O95096 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.76■■□□□ 1.07
NKX2-2O95096 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-2O95096 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-2O95096 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.76■■□□□ 1.07
NKX2-2O95096 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NKX2-2O95096 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-2O95096 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-2O95096 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms