Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM3O75382 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM3O75382 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM3O75382 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM3O75382 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM3O75382 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM3O75382 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 AC019171.1-201ENST00000601251 1056 ntBASIC21.85■■□□□ 1.09
TRIM3O75382 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM3O75382 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM3O75382 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM3O75382 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TRIM3O75382 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM3O75382 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM3O75382 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM3O75382 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM3O75382 LONRF2P2-201ENST00000439212 571 ntBASIC21.84■■□□□ 1.09
TRIM3O75382 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM3O75382 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM3O75382 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TRIM3O75382 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM3O75382 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
TRIM3O75382 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM3O75382 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM3O75382 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM3O75382 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM3O75382 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM3O75382 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM3O75382 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM3O75382 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM3O75382 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM3O75382 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM3O75382 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM3O75382 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM3O75382 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM3O75382 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM3O75382 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM3O75382 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM3O75382 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM3O75382 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM3O75382 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM3O75382 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM3O75382 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM3O75382 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM3O75382 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM3O75382 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM3O75382 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM3O75382 AC103834.1-201ENST00000520383 144 ntBASIC21.8■■□□□ 1.08
TRIM3O75382 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM3O75382 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM3O75382 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM3O75382 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM3O75382 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM3O75382 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM3O75382 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM3O75382 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
TRIM3O75382 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM3O75382 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM3O75382 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM3O75382 MIR4508-201ENST00000584178 70 ntBASIC21.78■■□□□ 1.08
TRIM3O75382 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 KRT8P33-201ENST00000508125 1423 ntBASIC21.78■■□□□ 1.08
TRIM3O75382 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM3O75382 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM3O75382 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM3O75382 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRIM3O75382 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM3O75382 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM3O75382 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM3O75382 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM3O75382 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRIM3O75382 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM3O75382 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM3O75382 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM3O75382 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRIM3O75382 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRIM3O75382 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM3O75382 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM3O75382 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM3O75382 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRIM3O75382 ERN1-208ENST00000606895 2068 ntBASIC21.75■■□□□ 1.07
TRIM3O75382 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms