Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.59■■□□□ 1.05
ARHGEF9O43307 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARHGEF9O43307 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ARHGEF9O43307 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.59■■□□□ 1.05
ARHGEF9O43307 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF9O43307 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ARHGEF9O43307 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ARHGEF9O43307 KRT18P60-201ENST00000312876 1297 ntBASIC21.58■■□□□ 1.05
ARHGEF9O43307 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF9O43307 ECEL1P2-201ENST00000461596 1295 ntBASIC21.58■■□□□ 1.05
ARHGEF9O43307 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.58■■□□□ 1.05
ARHGEF9O43307 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ARHGEF9O43307 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF9O43307 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ARHGEF9O43307 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF9O43307 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF9O43307 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF9O43307 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF9O43307 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ARHGEF9O43307 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF9O43307 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
ARHGEF9O43307 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF9O43307 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF9O43307 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF9O43307 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF9O43307 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.56■■□□□ 1.04
ARHGEF9O43307 AC096887.2-201ENST00000623443 1957 ntBASIC21.56■■□□□ 1.04
ARHGEF9O43307 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ARHGEF9O43307 RARRES2P1-201ENST00000474487 481 ntBASIC21.55■■□□□ 1.04
ARHGEF9O43307 AC092296.2-201ENST00000589470 999 ntBASIC21.55■■□□□ 1.04
ARHGEF9O43307 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.55■■□□□ 1.04
ARHGEF9O43307 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF9O43307 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.55■■□□□ 1.04
ARHGEF9O43307 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF9O43307 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF9O43307 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF9O43307 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF9O43307 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF9O43307 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.54■■□□□ 1.04
ARHGEF9O43307 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF9O43307 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF9O43307 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF9O43307 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF9O43307 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF9O43307 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF9O43307 AL157400.5-201ENST00000507624 621 ntBASIC21.53■■□□□ 1.04
ARHGEF9O43307 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF9O43307 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF9O43307 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.53■■□□□ 1.04
ARHGEF9O43307 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF9O43307 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF9O43307 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF9O43307 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.52■■□□□ 1.04
ARHGEF9O43307 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF9O43307 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.52■■□□□ 1.04
ARHGEF9O43307 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.52■■□□□ 1.04
ARHGEF9O43307 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
ARHGEF9O43307 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF9O43307 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.52■■□□□ 1.03
ARHGEF9O43307 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF9O43307 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF9O43307 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF9O43307 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF9O43307 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.51■■□□□ 1.03
ARHGEF9O43307 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ARHGEF9O43307 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF9O43307 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
ARHGEF9O43307 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF9O43307 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF9O43307 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms