Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 KRT16P3-201ENST00000439127 1283 ntBASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV10A0A0B4J240 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
TRAV10A0A0B4J240 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.64■□□□□ 0.26
TRAV10A0A0B4J240 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV10A0A0B4J240 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 TSPY9P-201ENST00000440215 945 ntBASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 TSPY11P-201ENST00000442607 1045 ntBASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV10A0A0B4J240 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 FOXO3B-201ENST00000395675 1928 ntBASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV10A0A0B4J240 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV10A0A0B4J240 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV10A0A0B4J240 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV10A0A0B4J240 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV10A0A0B4J240 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV10A0A0B4J240 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 UNC93B8-201ENST00000511903 705 ntBASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 AC092028.1-203ENST00000608262 953 ntBASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV10A0A0B4J240 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV10A0A0B4J240 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 AC097639.1-201ENST00000565519 1891 ntBASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV10A0A0B4J240 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV10A0A0B4J240 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV10A0A0B4J240 AC008406.3-201ENST00000620001 1374 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms