Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 AC110285.6-201ENST00000617652 491 ntBASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CCDC187A0A096LP49 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.58■■□□□ 1.21
CCDC187A0A096LP49 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC187A0A096LP49 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.58■■□□□ 1.21
CCDC187A0A096LP49 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC187A0A096LP49 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC187A0A096LP49 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 AC096631.2-201ENST00000436136 790 ntBASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC187A0A096LP49 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC187A0A096LP49 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC187A0A096LP49 MIR4466-201ENST00000606121 54 ntBASIC22.55■■□□□ 1.2
CCDC187A0A096LP49 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC187A0A096LP49 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC187A0A096LP49 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC187A0A096LP49 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC187A0A096LP49 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC187A0A096LP49 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC187A0A096LP49 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC187A0A096LP49 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC187A0A096LP49 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 AC005837.3-201ENST00000612163 286 ntBASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC187A0A096LP49 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC187A0A096LP49 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.51■■□□□ 1.19
CCDC187A0A096LP49 AL512631.2-201ENST00000604634 923 ntBASIC22.51■■□□□ 1.19
CCDC187A0A096LP49 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.51■■□□□ 1.19
CCDC187A0A096LP49 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 AF131216.4-201ENST00000638924 1588 ntBASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC187A0A096LP49 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC187A0A096LP49 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC187A0A096LP49 AC133561.4-201ENST00000566112 224 ntBASIC22.49■■□□□ 1.19
CCDC187A0A096LP49 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC187A0A096LP49 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CCDC187A0A096LP49 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC187A0A096LP49 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
CCDC187A0A096LP49 FOXO3B-201ENST00000395675 1928 ntBASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC187A0A096LP49 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC187A0A096LP49 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC187A0A096LP49 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.44■■□□□ 1.18
CCDC187A0A096LP49 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC187A0A096LP49 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.44■■□□□ 1.18
CCDC187A0A096LP49 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC187A0A096LP49 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms