Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 FAM21FP-201ENST00000426241 1131 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 RPL7P3-201ENST00000441388 714 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AP001889.1-201ENST00000525414 633 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AC068587.3-201ENST00000526613 355 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 ENPP7P5-201ENST00000541031 1031 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 INTS4P2-202ENST00000614726 2019 ntBASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC2Q9Y5Z7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AC020907.1-201ENST00000616460 1350 ntBASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AC124283.3-201ENST00000570869 594 ntBASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC2Q9Y5Z7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 AC078925.2-201ENST00000624013 1973 ntBASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 SOCS2P1-201ENST00000417727 557 ntBASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 AC134915.1-201ENST00000426461 574 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms