Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 RNF216P1-203ENST00000404404 2427 ntBASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 TMEM14DP-201ENST00000422205 345 ntBASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 AL592424.1-201ENST00000563624 1536 ntBASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 LINC01115-203ENST00000606068 577 ntBASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB7Q9Y5E2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB7Q9Y5E2 KRT8P37-201ENST00000451609 1420 ntBASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 UBALD1-205ENST00000590891 2641 ntBASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC015936.2-201ENST00000593177 259 ntBASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 AC078925.2-201ENST00000624013 1973 ntBASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB7Q9Y5E2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AZGP1P1-201ENST00000411909 902 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC245100.5-201ENST00000452108 331 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC036164.1-201ENST00000570544 333 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC008735.3-201ENST00000596646 500 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms