Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AC006504.4-201ENST00000592118 1568 ntBASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ATP5G2P1-201ENST00000433580 426 ntBASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AL049597.2-201ENST00000565575 961 ntBASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AC092119.3-201ENST00000612618 583 ntBASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
UBE2D4Q9Y2X8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
UBE2D4Q9Y2X8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
UBE2D4Q9Y2X8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 SART3-203ENST00000546611 1184 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AC087388.1-201ENST00000571370 1112 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AC006557.2-201ENST00000592985 1240 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AL732292.2-201ENST00000609649 430 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AL355877.3-201ENST00000622820 899 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AP000550.4-202ENST00000639755 178 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 AC087481.3-201ENST00000602886 1894 ntBASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2D4Q9Y2X8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms