Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RPH3AQ9Y2J0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GGT3P-204ENST00000453783 1664 ntBASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TSEN15P1-201ENST00000423257 515 ntBASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 SLC25A39P2-201ENST00000537614 270 ntBASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 LINC01225-203ENST00000563550 1244 ntBASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.94□□□□□ -0.02
RPH3AQ9Y2J0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 FAM58DP-201ENST00000428076 619 ntBASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AC004449.1-201ENST00000564240 433 ntBASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms