Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 MCCD1P2-201ENST00000423228 335 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AP000347.1-202ENST00000435868 847 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AC112191.1-201ENST00000523689 701 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AP002472.1-201ENST00000577490 586 ntBASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAPPC4Q9Y296 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 AP005117.1-202ENST00000581724 1908 ntBASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 AC023274.1-201ENST00000418278 595 ntBASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 MTDHP5-201ENST00000598980 586 ntBASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 LINC01144-201ENST00000626198 1710 ntBASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC4Q9Y296 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 2592.7 ms