Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AL138918.1-201ENST00000568306 659 ntBASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AC004835.2-201ENST00000603762 682 ntBASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AC092364.2-201ENST00000596710 2692 ntBASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPARGC1AQ9UBK2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 IGHV3-62-201ENST00000520057 340 ntBASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 AL691403.2-201ENST00000618460 490 ntBASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 AC068418.2-201ENST00000577309 3703 ntBASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 AC063926.3-201ENST00000624734 5658 ntBASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 AC103702.1-201ENST00000548801 2630 ntBASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPARGC1AQ9UBK2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 ALOX12P2-203ENST00000570921 1945 ntBASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 CNN2P11-201ENST00000429351 262 ntBASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 DNAJB3-202ENST00000449667 1266 ntBASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AC069335.1-201ENST00000489972 472 ntBASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AP000842.3-202ENST00000569238 1080 ntBASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.94■□□□□ 0.3
PPARGC1AQ9UBK2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms