Protein–RNA interactions for Protein: Q9P1U1

ACTR3B, Actin-related protein 3B, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3BQ9P1U1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ACTR3BQ9P1U1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 AC023908.3-201ENST00000564211 3047 ntBASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 RBM17P3-201ENST00000417687 1192 ntBASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 KRT16P4-201ENST00000453883 522 ntBASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ACTR3BQ9P1U1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 AC112693.3-201ENST00000624819 1983 ntBASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 MIR3180-1-201ENST00000580374 94 ntBASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 MIR3180-3-201ENST00000584616 94 ntBASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.29■□□□□ 0.04
ACTR3BQ9P1U1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms