Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 AL137013.1-201ENST00000432946 1228 ntBASIC15.78■□□□□ 0.12
NDE1Q9NXR1 KRT8P26-201ENST00000534154 1276 ntBASIC15.78■□□□□ 0.12
NDE1Q9NXR1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 TMEM191A-211ENST00000637163 1067 ntBASIC15.78■□□□□ 0.12
NDE1Q9NXR1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AC113347.1-201ENST00000413321 391 ntBASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDE1Q9NXR1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDE1Q9NXR1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 LINC00528-201ENST00000600723 2160 ntBASIC15.76■□□□□ 0.11
NDE1Q9NXR1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDE1Q9NXR1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms