Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 AC006538.1-201ENST00000567905 1585 ntBASIC17.11■□□□□ 0.33
TLR9Q9NR96 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC005622.1-201ENST00000636801 1703 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 HAUS4P1-201ENST00000406739 1145 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 RN7SL399P-201ENST00000471648 279 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC036164.1-201ENST00000570544 333 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC233724.13-201ENST00000598383 410 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 AC018665.1-201ENST00000622927 1362 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 Z97205.2-201ENST00000564697 1639 ntBASIC17.1■□□□□ 0.33
TLR9Q9NR96 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR9Q9NR96 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TLR9Q9NR96 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 AC060834.1-201ENST00000443027 2032 ntBASIC17.09■□□□□ 0.33
TLR9Q9NR96 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.09■□□□□ 0.33
TLR9Q9NR96 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR9Q9NR96 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
TLR9Q9NR96 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TLR9Q9NR96 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TLR9Q9NR96 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TLR9Q9NR96 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TLR9Q9NR96 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TLR9Q9NR96 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TLR9Q9NR96 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms