Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 KRT18P48-201ENST00000434763 852 ntBASIC19.31■□□□□ 0.68
RTN4Q9NQC3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 AP005117.1-202ENST00000581724 1908 ntBASIC19.31■□□□□ 0.68
RTN4Q9NQC3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4Q9NQC3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 AC013726.1-201ENST00000563747 2285 ntBASIC19.3■□□□□ 0.68
RTN4Q9NQC3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4Q9NQC3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 MYO15B-237ENST00000642007 4893 ntBASIC19.29■□□□□ 0.68
RTN4Q9NQC3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms