Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 FAM58DP-201ENST00000428076 619 ntBASIC17.12■□□□□ 0.33
CD248Q9HCU0 GPS2P2-201ENST00000430745 888 ntBASIC17.12■□□□□ 0.33
CD248Q9HCU0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC092364.2-202ENST00000597012 1073 ntBASIC17.12■□□□□ 0.33
CD248Q9HCU0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC116353.5-201ENST00000638148 1699 ntBASIC17.12■□□□□ 0.33
CD248Q9HCU0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD248Q9HCU0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
CD248Q9HCU0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.11■□□□□ 0.33
CD248Q9HCU0 TFAMP1-201ENST00000412727 736 ntBASIC17.11■□□□□ 0.33
CD248Q9HCU0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 LINC01225-203ENST00000563550 1244 ntBASIC17.11■□□□□ 0.33
CD248Q9HCU0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 AC005412.3-201ENST00000580309 715 ntBASIC17.11■□□□□ 0.33
CD248Q9HCU0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD248Q9HCU0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CD248Q9HCU0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms