Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 BNIP3P1-202ENST00000550043 1585 ntBASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AC004987.2-201ENST00000395959 1148 ntBASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 GPS2P2-201ENST00000430745 888 ntBASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AC005237.2-201ENST00000434368 219 ntBASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCSER1Q9C0I3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AL136982.4-201ENST00000437689 1740 ntBASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AP006288.1-201ENST00000446065 395 ntBASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCSER1Q9C0I3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 CICP6-201ENST00000457191 2729 ntBASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 AC046158.3-201ENST00000624947 2558 ntBASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.08■□□□□ 0.49
CCSER1Q9C0I3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSER1Q9C0I3 KRT18P32-201ENST00000424695 1287 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms