Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.69□□□□□ -0.22
PCGF1Q9BSM1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC023141.5-201ENST00000458585 616 ntBASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 UXT-AS1-201ENST00000590504 1525 ntBASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCGF1Q9BSM1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 RNF216P1-203ENST00000404404 2427 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 KRT18P32-201ENST00000424695 1287 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 MIR4492-201ENST00000581627 80 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 AC021097.1-201ENST00000607902 574 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 AC106028.4-201ENST00000614509 607 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 AC093028.1-201ENST00000622998 982 ntBASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms