Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 FAM86LP-201ENST00000478302 853 ntBASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC022188.1-201ENST00000620960 1664 ntBASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC106886.1-201ENST00000568660 600 ntBASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP2Q96SN8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.77■□□□□ 0.59
CDK5RAP2Q96SN8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 MEP1AP4-201ENST00000423244 1087 ntBASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 AC092552.1-201ENST00000547243 906 ntBASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 AC006449.5-201ENST00000610658 2098 ntBASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP2Q96SN8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 RNU1-114P-201ENST00000365297 166 ntBASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms