Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC85AQ96PX6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 KRT17P7-201ENST00000451704 1104 ntBASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 TPRX2P-201ENST00000535362 881 ntBASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 CR383656.12-201ENST00000549567 513 ntBASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC85AQ96PX6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 AL662844.4-201ENST00000606367 2838 ntBASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 INE1-201ENST00000456273 945 ntBASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC85AQ96PX6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 LTB4R2-202ENST00000528054 3092 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AD000864.1-201ENST00000624076 2295 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms