Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 AC004449.1-201ENST00000564240 433 ntBASIC13.47□□□□□ -0.25
GAFA1Q96PS6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 CDC14C-201ENST00000428251 1719 ntBASIC13.47□□□□□ -0.25
GAFA1Q96PS6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 KRT18P28-201ENST00000453838 1332 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 PCDHA1-201ENST00000378133 2726 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TNRC18P3-201ENST00000441896 2691 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 METTL21AP1-201ENST00000438852 635 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AL139010.1-201ENST00000454878 894 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC069262.1-201ENST00000539058 672 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 BANF1P1-201ENST00000553684 263 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC105021.1-202ENST00000570572 669 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 MIR4453-201ENST00000584019 89 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC026979.3-201ENST00000607315 403 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC007967.4-201ENST00000614700 386 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AC093028.1-201ENST00000622998 982 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AP001282.1-201ENST00000531301 1499 ntBASIC13.46□□□□□ -0.25
GAFA1Q96PS6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GAFA1Q96PS6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GAFA1Q96PS6 LINC02447-202ENST00000501888 2146 ntBASIC13.46□□□□□ -0.26
GAFA1Q96PS6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.46□□□□□ -0.26
GAFA1Q96PS6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.46□□□□□ -0.26
GAFA1Q96PS6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms