Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AL133215.2-201ENST00000609242 977 ntBASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ZNF48Q96MX3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ZNF48Q96MX3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC006538.1-201ENST00000567905 1585 ntBASIC13.2□□□□□ -0.3
ZNF48Q96MX3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 GK-202ENST00000378941 458 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AL596325.1-201ENST00000563991 1082 ntBASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AC027307.3-201ENST00000594262 1100 ntBASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF48Q96MX3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms