Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC17Q96LX7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 DGCR5-201ENST00000399539 862 ntBASIC18.78■□□□□ 0.6
CCDC17Q96LX7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC17Q96LX7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AC138969.3-201ENST00000546612 1459 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AC138932.2-201ENST00000548268 1459 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AC126755.4-201ENST00000549796 1459 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 MIR648-201ENST00000385046 94 ntBASIC18.77■□□□□ 0.6
CCDC17Q96LX7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC17Q96LX7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms