Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 UXT-AS1-201ENST00000590504 1525 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 AC006449.6-201ENST00000612330 2296 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 AC007950.2-201ENST00000615045 2347 ntBASIC19.29■□□□□ 0.68
DDX11Q96FC9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 LINC01144-201ENST00000626198 1710 ntBASIC19.29■□□□□ 0.68
DDX11Q96FC9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 RNA5SP421-201ENST00000516864 134 ntBASIC19.29■□□□□ 0.68
DDX11Q96FC9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX11Q96FC9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX11Q96FC9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.28■□□□□ 0.68
DDX11Q96FC9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 AC109635.5-201ENST00000533593 962 ntBASIC19.28■□□□□ 0.68
DDX11Q96FC9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 AL031055.1-201ENST00000606362 631 ntBASIC19.28■□□□□ 0.68
DDX11Q96FC9 AP001059.3-201ENST00000619053 235 ntBASIC19.28■□□□□ 0.68
DDX11Q96FC9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX11Q96FC9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX11Q96FC9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 TUBB3P1-201ENST00000405796 1332 ntBASIC19.27■□□□□ 0.68
DDX11Q96FC9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms