Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 MIR770-201ENST00000390219 98 ntBASIC16.66■□□□□ 0.26
CCDC97Q96F63 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CEND1P1-201ENST00000451006 455 ntBASIC16.66■□□□□ 0.26
CCDC97Q96F63 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 AC131009.4-201ENST00000624048 1740 ntBASIC16.66■□□□□ 0.26
CCDC97Q96F63 TSPY26P-202ENST00000565928 3884 ntBASIC16.66■□□□□ 0.26
CCDC97Q96F63 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC97Q96F63 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC97Q96F63 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ACTG1P14-201ENST00000446382 1122 ntBASIC16.65■□□□□ 0.26
CCDC97Q96F63 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ALG1L5P-201ENST00000482043 771 ntBASIC16.65■□□□□ 0.26
CCDC97Q96F63 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC97Q96F63 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC97Q96F63 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC97Q96F63 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC97Q96F63 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CCDC97Q96F63 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 RHOQP3-201ENST00000437982 621 ntBASIC16.64■□□□□ 0.25
CCDC97Q96F63 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 AC005052.1-201ENST00000625181 2492 ntBASIC16.64■□□□□ 0.25
CCDC97Q96F63 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms