Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
RNF183Q96D59 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.11□□□□□ -0.47
RNF183Q96D59 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RNF183Q96D59 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC069335.1-201ENST00000489972 472 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.11□□□□□ -0.47
RNF183Q96D59 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC109322.1-201ENST00000524499 1264 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC106028.4-201ENST00000614509 607 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 AC008267.7-201ENST00000624570 1194 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.11□□□□□ -0.47
RNF183Q96D59 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
RNF183Q96D59 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
RNF183Q96D59 AC006277.1-201ENST00000624348 1610 ntBASIC12.11□□□□□ -0.47
RNF183Q96D59 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RNF183Q96D59 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 AC016027.1-202ENST00000607927 1699 ntBASIC12.1□□□□□ -0.47
RNF183Q96D59 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RNF183Q96D59 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.1□□□□□ -0.47
RNF183Q96D59 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RNF183Q96D59 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.1□□□□□ -0.47
RNF183Q96D59 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.1□□□□□ -0.47
RNF183Q96D59 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 HMGN1P19-201ENST00000436976 333 ntBASIC12.1□□□□□ -0.47
RNF183Q96D59 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 KRT18P34-201ENST00000488218 1270 ntBASIC12.1□□□□□ -0.47
RNF183Q96D59 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.1□□□□□ -0.47
RNF183Q96D59 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 LINC01225-203ENST00000563550 1244 ntBASIC12.1□□□□□ -0.47
RNF183Q96D59 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RNF183Q96D59 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RNF183Q96D59 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
RNF183Q96D59 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RNF183Q96D59 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms