Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 ACTG1P3-201ENST00000431775 1114 ntBASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 BNIP3P1-202ENST00000550043 1585 ntBASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 PDIA3P1-201ENST00000471856 1510 ntBASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 BRI3BPP1-201ENST00000594224 787 ntBASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF4Q8WZA2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 CTBP2P5-201ENST00000454986 1264 ntBASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 TDH-203ENST00000531764 1110 ntBASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AL359711.2-201ENST00000563105 872 ntBASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF4Q8WZA2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 FAM86MP-201ENST00000340703 885 ntBASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms