Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.7■□□□□ 0.26
SCG3Q8WXD2 AC063926.3-201ENST00000624734 5658 ntBASIC16.7■□□□□ 0.26
SCG3Q8WXD2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AL031432.2-201ENST00000566714 459 ntBASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AL928711.1-201ENST00000570165 459 ntBASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AP002472.1-201ENST00000577490 586 ntBASIC16.69■□□□□ 0.26
SCG3Q8WXD2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AL645728.2-201ENST00000641974 660 ntBASIC16.69■□□□□ 0.26
SCG3Q8WXD2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 ME2P1-201ENST00000426028 1970 ntBASIC16.69■□□□□ 0.26
SCG3Q8WXD2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCG3Q8WXD2 AC068587.6-202ENST00000641839 5619 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC099063.4-201ENST00000641099 1602 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC002056.1-201ENST00000395613 760 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC004835.2-201ENST00000603762 682 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AL355385.1-201ENST00000606123 409 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ACTL9-202ENST00000612068 1252 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 GGT3P-204ENST00000453783 1664 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC126177.1-201ENST00000547829 2218 ntBASIC16.68■□□□□ 0.26
SCG3Q8WXD2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCG3Q8WXD2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms