Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC010491.1-201ENST00000563101 2797 ntBASIC14.53□□□□□ -0.08
RNF138Q8WVD3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC044860.1-202ENST00000559481 777 ntBASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC092337.1-201ENST00000568699 1129 ntBASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.53□□□□□ -0.08
RNF138Q8WVD3 AC004840.1-201ENST00000636359 365 ntBASIC14.53□□□□□ -0.08
RNF138Q8WVD3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF138Q8WVD3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 PCDHA1-201ENST00000378133 2726 ntBASIC14.52□□□□□ -0.08
RNF138Q8WVD3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 AC018892.3-201ENST00000623986 2499 ntBASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF138Q8WVD3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 UGT1A2P-201ENST00000454886 866 ntBASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.52□□□□□ -0.09
RNF138Q8WVD3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 AP005117.1-202ENST00000581724 1908 ntBASIC14.51□□□□□ -0.09
RNF138Q8WVD3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF138Q8WVD3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms