Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 METTL21AP1-201ENST00000438852 635 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC008677.1-201ENST00000519230 1561 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 MIR4453-201ENST00000584019 89 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC018529.1-201ENST00000613063 361 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AP001059.3-201ENST00000619053 235 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AC093028.1-201ENST00000622998 982 ntBASIC17.17■□□□□ 0.34
UBA3Q8TBC4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBA3Q8TBC4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 MIR6080-201ENST00000617359 66 ntBASIC17.16■□□□□ 0.34
UBA3Q8TBC4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBA3Q8TBC4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 AL513523.2-202ENST00000427283 2040 ntBASIC17.15■□□□□ 0.34
UBA3Q8TBC4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 AC092183.1-201ENST00000469884 875 ntBASIC17.15■□□□□ 0.34
UBA3Q8TBC4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms