Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
VPS8Q8N3P4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.02■■□□□ 1.6
VPS8Q8N3P4 AP005018.1-201ENST00000525475 301 ntBASIC25.02■■□□□ 1.6
VPS8Q8N3P4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.02■■□□□ 1.6
VPS8Q8N3P4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC25.02■■□□□ 1.6
VPS8Q8N3P4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.6
VPS8Q8N3P4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 SUPT20HL2-201ENST00000486479 2409 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 TOMM22P5-201ENST00000416399 439 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 USP40-206ENST00000443711 628 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 RRP7BP-205ENST00000566851 833 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 MIR4313-201ENST00000580760 101 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 AC007431.3-201ENST00000623221 587 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 AF228730.6-201ENST00000641497 218 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 AC084121.3-201ENST00000641716 218 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 AC105233.6-201ENST00000642093 218 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 AL391825.1-201ENST00000457671 1364 ntBASIC25.01■■□□□ 1.59
VPS8Q8N3P4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC25.01■■□□□ 1.59
VPS8Q8N3P4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC25■■□□□ 1.59
VPS8Q8N3P4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC25■■□□□ 1.59
VPS8Q8N3P4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC25■■□□□ 1.59
VPS8Q8N3P4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC25■■□□□ 1.59
VPS8Q8N3P4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC25■■□□□ 1.59
VPS8Q8N3P4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC25■■□□□ 1.59
VPS8Q8N3P4 CD81-207ENST00000481687 890 ntTSL 2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC25■■□□□ 1.59
VPS8Q8N3P4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC25■■□□□ 1.59
VPS8Q8N3P4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
VPS8Q8N3P4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC25■■□□□ 1.59
VPS8Q8N3P4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 AC098850.1-201ENST00000419919 790 ntBASIC24.99■■□□□ 1.59
VPS8Q8N3P4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC24.99■■□□□ 1.59
VPS8Q8N3P4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 MEIS3P1-201ENST00000495167 958 ntBASIC24.98■■□□□ 1.59
VPS8Q8N3P4 TP53TG3HP-202ENST00000569755 579 ntBASIC24.98■■□□□ 1.59
VPS8Q8N3P4 CHCHD2P3-201ENST00000603038 451 ntBASIC24.98■■□□□ 1.59
VPS8Q8N3P4 AC012645.4-201ENST00000610691 1061 ntBASIC24.98■■□□□ 1.59
VPS8Q8N3P4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms