Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 BNIP3P42-201ENST00000454982 569 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 RARRES2P5-201ENST00000564013 466 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 AC010319.3-201ENST00000597028 470 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 BNIP3P29-201ENST00000598302 571 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 AC011447.5-201ENST00000616168 564 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 AL136982.4-201ENST00000437689 1740 ntBASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEFF1Q8IYR6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 ANKRD19P-201ENST00000338192 862 ntBASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AC104989.1-201ENST00000519711 778 ntBASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 AC015936.2-201ENST00000593177 259 ntBASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 RNF216P1-203ENST00000404404 2427 ntBASIC16.03■□□□□ 0.16
TMEFF1Q8IYR6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 OR6D1P-203ENST00000641209 4860 ntBASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 MIR4525-201ENST00000580000 75 ntBASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 BTNL10-201ENST00000595971 695 ntBASIC16.02■□□□□ 0.16
TMEFF1Q8IYR6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms