Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.4□□□□□ -0.1
RTTNQ86VV8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RTTNQ86VV8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.4□□□□□ -0.1
RTTNQ86VV8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTTNQ86VV8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
RTTNQ86VV8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 GAPDHP21-201ENST00000450301 1010 ntBASIC14.39□□□□□ -0.11
RTTNQ86VV8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 AP002490.2-201ENST00000524791 560 ntBASIC14.39□□□□□ -0.11
RTTNQ86VV8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 DBET-201ENST00000630918 3363 ntBASIC14.39□□□□□ -0.11
RTTNQ86VV8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RTTNQ86VV8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTTNQ86VV8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 FAM58CP-201ENST00000435741 640 ntBASIC14.38□□□□□ -0.11
RTTNQ86VV8 AC002472.2-201ENST00000442739 958 ntBASIC14.38□□□□□ -0.11
RTTNQ86VV8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 AP000344.2-201ENST00000512987 629 ntBASIC14.38□□□□□ -0.11
RTTNQ86VV8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 IGHV3-71-201ENST00000523324 359 ntBASIC14.38□□□□□ -0.11
RTTNQ86VV8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms