Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ALG1L8P-201ENST00000533887 760 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 AC027796.2-201ENST00000575326 344 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 FAM220BP-201ENST00000377689 816 ntBASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 HLA-H-201ENST00000383620 1096 ntBASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 AL596087.1-201ENST00000400979 1969 ntBASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 AL355385.1-201ENST00000606123 409 ntBASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 AP3S2-216ENST00000617003 1561 ntBASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD3Q7Z3D4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AL139400.1-201ENST00000366220 510 ntBASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 TSEN15P1-201ENST00000423257 515 ntBASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 RARRES2P9-201ENST00000565168 469 ntBASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD3Q7Z3D4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms