Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SCXQ7RTU7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SCXQ7RTU7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SCXQ7RTU7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.84□□□□□ -0.67
SCXQ7RTU7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
SCXQ7RTU7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.67
SCXQ7RTU7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PAWRP1-201ENST00000451083 565 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CYMP-203ENST00000474680 1263 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 RFPL4AP1-201ENST00000530883 850 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC027612.4-201ENST00000605371 583 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 ACTL9-202ENST00000612068 1252 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC026691.1-201ENST00000602502 2017 ntBASIC10.83□□□□□ -0.68
SCXQ7RTU7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SCXQ7RTU7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SCXQ7RTU7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms