Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AC080080.1-201ENST00000625121 2420 ntBASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FO393414.2-201ENST00000405153 598 ntBASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AC025048.3-201ENST00000590609 569 ntBASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AC005702.4-201ENST00000618393 416 ntBASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 UBALD1-205ENST00000590891 2641 ntBASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC62Q6P9F0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC023310.3-201ENST00000557027 670 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC100756.1-201ENST00000562736 682 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC138749.3-201ENST00000567691 622 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC092337.1-201ENST00000568699 1129 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC008494.3-201ENST00000606615 944 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 AC116165.1-201ENST00000611806 668 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 TNRC18P3-201ENST00000441896 2691 ntBASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC62Q6P9F0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms