Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 NOC2LP2-201ENST00000407594 1944 ntBASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 BCYRN1-201ENST00000418539 200 ntBASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 INTS4P2-202ENST00000614726 2019 ntBASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD4Q5XG99 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 AC092933.1-201ENST00000393644 945 ntBASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 AP001889.1-201ENST00000525414 633 ntBASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
LYSMD4Q5XG99 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 AC018470.1-201ENST00000624790 3129 ntBASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 LETM1P2-201ENST00000597330 2178 ntBASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.77■□□□□ 0.11
LYSMD4Q5XG99 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TARDBPP1-201ENST00000442013 1203 ntBASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC245100.5-201ENST00000452108 331 ntBASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC009486.1-201ENST00000569860 813 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms