Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 RN7SL204P-201ENST00000582831 262 ntBASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.15■□□□□ 0.5
HERC4Q5GLZ8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HERC4Q5GLZ8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 ADH5P3-201ENST00000433842 1137 ntBASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 AC008741.2-201ENST00000612792 3115 ntBASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 LINC02199-201ENST00000506655 2702 ntBASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HERC4Q5GLZ8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms