Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
DDR1Q08345 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.87■□□□□ 0.77
DDR1Q08345 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DDR1Q08345 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
DDR1Q08345 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.87■□□□□ 0.77
DDR1Q08345 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
DDR1Q08345 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
DDR1Q08345 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDR1Q08345 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.86■□□□□ 0.77
DDR1Q08345 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 AC104306.2-201ENST00000451877 341 ntBASIC19.86■□□□□ 0.77
DDR1Q08345 AC245100.5-201ENST00000452108 331 ntBASIC19.86■□□□□ 0.77
DDR1Q08345 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.86■□□□□ 0.77
DDR1Q08345 AC022137.2-201ENST00000503482 481 ntBASIC19.86■□□□□ 0.77
DDR1Q08345 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
DDR1Q08345 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.86■□□□□ 0.77
DDR1Q08345 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.86■□□□□ 0.77
DDR1Q08345 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.86■□□□□ 0.77
DDR1Q08345 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDR1Q08345 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DDR1Q08345 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.86■□□□□ 0.77
DDR1Q08345 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 SLC25A24P2-201ENST00000415059 510 ntBASIC19.85■□□□□ 0.77
DDR1Q08345 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.85■□□□□ 0.77
DDR1Q08345 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.85■□□□□ 0.77
DDR1Q08345 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 AP001258.2-201ENST00000529891 490 ntBASIC19.85■□□□□ 0.77
DDR1Q08345 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.85■□□□□ 0.77
DDR1Q08345 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 AL022328.3-201ENST00000607943 679 ntBASIC19.85■□□□□ 0.77
DDR1Q08345 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 AL592424.1-201ENST00000563624 1536 ntBASIC19.85■□□□□ 0.77
DDR1Q08345 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.85■□□□□ 0.77
DDR1Q08345 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DDR1Q08345 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
DDR1Q08345 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDR1Q08345 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.84■□□□□ 0.77
DDR1Q08345 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.84■□□□□ 0.77
DDR1Q08345 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDR1Q08345 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms