Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 AC103702.1-201ENST00000548801 2630 ntBASIC17.32■□□□□ 0.36
CDR2Q01850 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.31■□□□□ 0.36
CDR2Q01850 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.31■□□□□ 0.36
CDR2Q01850 MCCD1P2-201ENST00000423228 335 ntBASIC17.31■□□□□ 0.36
CDR2Q01850 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 FAM58CP-201ENST00000435741 640 ntBASIC17.31■□□□□ 0.36
CDR2Q01850 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.31■□□□□ 0.36
CDR2Q01850 PGAM5P1-201ENST00000518923 814 ntBASIC17.31■□□□□ 0.36
CDR2Q01850 AL135744.1-201ENST00000565098 629 ntBASIC17.31■□□□□ 0.36
CDR2Q01850 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDR2Q01850 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
CDR2Q01850 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDR2Q01850 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDR2Q01850 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.3■□□□□ 0.36
CDR2Q01850 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
CDR2Q01850 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 LINC00554-201ENST00000564841 3011 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
CDR2Q01850 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
CDR2Q01850 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.3■□□□□ 0.36
CDR2Q01850 AL022342.1-201ENST00000400363 863 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.3■□□□□ 0.36
CDR2Q01850 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDR2Q01850 TFAMP1-201ENST00000412727 736 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 ADH5P3-201ENST00000433842 1137 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 AC105233.2-201ENST00000523697 349 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 AF228730.5-201ENST00000530288 346 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.3■□□□□ 0.36
CDR2Q01850 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.3■□□□□ 0.36
CDR2Q01850 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDR2Q01850 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 FOXO1B-201ENST00000504678 1527 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDR2Q01850 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDR2Q01850 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.3■□□□□ 0.36
CDR2Q01850 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
CDR2Q01850 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDR2Q01850 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 MST1L-201ENST00000442552 2185 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms