Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC254562.1-201ENST00000417586 456 ntBASIC15.82■□□□□ 0.12
YBX1P67809 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.82■□□□□ 0.12
YBX1P67809 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.82■□□□□ 0.12
YBX1P67809 SLC25A39P2-201ENST00000537614 270 ntBASIC15.82■□□□□ 0.12
YBX1P67809 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.82■□□□□ 0.12
YBX1P67809 AP000842.3-202ENST00000569238 1080 ntBASIC15.82■□□□□ 0.12
YBX1P67809 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
YBX1P67809 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.82■□□□□ 0.12
YBX1P67809 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
YBX1P67809 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 UXT-AS1-201ENST00000590504 1525 ntBASIC15.82■□□□□ 0.12
YBX1P67809 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.82■□□□□ 0.12
YBX1P67809 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.82■□□□□ 0.12
YBX1P67809 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
YBX1P67809 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
YBX1P67809 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 MIR346-201ENST00000362234 95 ntBASIC15.81■□□□□ 0.12
YBX1P67809 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 AL627223.1-201ENST00000416693 442 ntBASIC15.81■□□□□ 0.12
YBX1P67809 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 AC142381.1-201ENST00000426099 345 ntBASIC15.81■□□□□ 0.12
YBX1P67809 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 AC005237.2-201ENST00000434368 219 ntBASIC15.81■□□□□ 0.12
YBX1P67809 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.81■□□□□ 0.12
YBX1P67809 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.81■□□□□ 0.12
YBX1P67809 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.81■□□□□ 0.12
YBX1P67809 AP000344.2-201ENST00000512987 629 ntBASIC15.81■□□□□ 0.12
YBX1P67809 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.81■□□□□ 0.12
YBX1P67809 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 SNHG9-202ENST00000564014 471 ntBASIC15.81■□□□□ 0.12
YBX1P67809 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
YBX1P67809 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 AP005117.1-202ENST00000581724 1908 ntBASIC15.81■□□□□ 0.12
YBX1P67809 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.81■□□□□ 0.12
YBX1P67809 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.81■□□□□ 0.12
YBX1P67809 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.81■□□□□ 0.12
YBX1P67809 AC112504.1-201ENST00000623415 1841 ntBASIC15.81■□□□□ 0.12
YBX1P67809 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
YBX1P67809 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YBX1P67809 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
YBX1P67809 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
YBX1P67809 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.8■□□□□ 0.12
YBX1P67809 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.8■□□□□ 0.12
YBX1P67809 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
YBX1P67809 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.8■□□□□ 0.12
YBX1P67809 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YBX1P67809 AL139400.1-201ENST00000366220 510 ntBASIC15.8■□□□□ 0.12
YBX1P67809 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.8■□□□□ 0.12
YBX1P67809 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms